Issues

• [Bug]: Re-running specify init --here --force resets feature_numbering in init-options.json to "sequential"

  triage-must-have
  github/spec-kit#5098 · Filter by author hnipps opened on Oct 23, 2026

• [Bug]: Cline extension and preset commands have speckit.*.md file names rewritten to speckit-*-md

  triage-can-wait
  github/spec-kit#5097 · Filter by author hnipps opened on Oct 23, 2026

• [Bug]: create-new-feature.sh rejects the feature descriptions -n, -e and -E, which the Python script accepts

  triage-can-wait
  github/spec-kit#5096 · Filter by author hnipps opened on Oct 23, 2026

• [Bug]: specify self upgrade reports "unsupported" for uv tool installs under XDG_DATA_HOME (and likely for current pipx installs)

  triage-nice-to-have
  github/spec-kit#5095 · Filter by author hnipps opened on Oct 23, 2026

• [Bug]: specify extension add --dev shows a traceback when .extensionignore is a directory

  triage-can-wait
  github/spec-kit#5094 · Filter by author hnipps opened on Oct 23, 2026

• [Bug]: Malformed events in an unregistered extension directory makes specify integration upgrade fail

  triage-can-wait
  github/spec-kit#5093 · Filter by author hnipps opened on Oct 23, 2026

• [Bug]: integration-events.yml entry without an events key silently removes all event hooks

  triage-must-have
  github/spec-kit#5092 · Filter by author hnipps opened on Oct 23, 2026

• [Bug]: integration: mapping without an id makes a bundle silently integration-agnostic

  triage-can-wait
  github/spec-kit#5091 · Filter by author hnipps opened on Oct 23, 2026

• [Bug]: bundle install rejects a local artifact with an upper-case .ZIP extension

  triage-can-wait
  github/spec-kit#5090 · Filter by author hnipps opened on Oct 23, 2026

• [Bug]: bundle init <bundle> initialises with the default integration instead of the bundle's, then aborts with a clash

  triage-must-have
  github/spec-kit#5089 · Filter by author hnipps opened on Oct 23, 2026

• [Bug]: bundle build reports success but omits a symlinked bundle.yml/README.md, producing an artifact that cannot be installed

  triage-can-wait
  github/spec-kit#5088 · Filter by author hnipps opened on Oct 23, 2026

• [Bug]: specify preset set-priority does not update agent command files that are already written

  triage-must-have
  github/spec-kit#5087 · Filter by author hnipps opened on Oct 23, 2026

• [Bug]: resolve_with_source reports a core template whose name starts with "overrides" as a project override

  triage-can-wait
  github/spec-kit#5086 · Filter by author hnipps opened on Oct 23, 2026

• [Bug]: preset add crashes with AttributeError when a composing command's frontmatter is not a YAML mapping

  triage-can-wait
  github/spec-kit#5085 · Filter by author hnipps opened on Oct 23, 2026

• [Bug]: Top-level defaults: in extension.yml, as documented and used in the extension template, is ignored by ConfigManager

  triage-must-have
  github/spec-kit#5084 · Filter by author hnipps opened on Oct 23, 2026

• [Bug]: Local config override file name differs between the docs (<id>-config.local.yml) and ConfigManager (local-config.yml)

  triage-must-have
  github/spec-kit#5083 · Filter by author hnipps opened on Oct 23, 2026

• [Bug]: specify extension update crashes with KeyError when a catalog entry has no version, and stops checking the other extensions

  triage-must-have
  github/spec-kit#5082 · Filter by author hnipps opened on Oct 23, 2026

• [Bug]: Extension alias conflict check misses spellings that map to the same file, so one extension overwrites and then deletes another's alias

  triage-must-have
  github/spec-kit#5081 · Filter by author hnipps opened on Oct 23, 2026

• [Bug]: A hook with a list-valued command passes manifest validation, then crashes extension add and leaves files behind

  triage-must-have
  github/spec-kit#5080 · Filter by author hnipps opened on Oct 23, 2026

• [Bug]: Removing Vibe event hooks deletes user comments that follow a Spec Kit hook block

  triage-must-have
  github/spec-kit#5079 · Filter by author hnipps opened on Oct 23, 2026

• [Bug]: integration switch leaves the manifest out of date when a preset overrides a core command

  triage-must-have
  github/spec-kit#5078 · Filter by author hnipps opened on Oct 23, 2026

• [Bug]: workflow add <url> installs workflow.yml with mode 0600, while a catalog install uses the project file mode

  triage-can-wait
  github/spec-kit#5077 · Filter by author hnipps opened on Oct 23, 2026

• [Bug]: Workflow commands crash with rich.errors.MarkupError when user or catalog text contains square brackets

  triage-must-have
  github/spec-kit#5076 · Filter by author hnipps opened on Oct 23, 2026

• [Bug]: workflow update rejects an archive catalog release when its version has leading zeros (for example CalVer 2024.02.01)

  triage-nice-to-have
  github/spec-kit#5075 · Filter by author hnipps opened on Oct 23, 2026

• [Bug]: catalog add gives the new catalog the same priority as the first existing catalog when priorities are implicit

  triage-must-have
  github/spec-kit#5074 · Filter by author hnipps opened on Oct 23, 2026